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Bellesia G., Jewett A.I, Shea J.-E.. 2010. Sequence periodicity and secondary structure propensity in model proteins. Protein Science. 19:141.

Bellesia G, Shea J-E. 2009. Effect of beta-sheet propensity on peptide aggregation.. J. Chem. Phys.. 130:145103.

Bellesia G., Lampoudi S., . S, Shea J.-E.. 2008. Computational Methods in Nanostructure Design: Replica Exchange Simulations of Self-Assembling Peptides. G.Bellesia, S. Lampoudi, S. & J.-E. Shea. 474:9.

Bellesia G., Shea J.-E.. 2008. Structure and stability of amyloid fibrils formed from synthetic beta-peptides. Frontiers in Bioscience. 13(9):6957-6965.

Berenbeim JA, Boldissar S, Owens S, Haggmark MR, Gate G, Siouri FM, Cohen T, Rode MF, C Patterson S, de Vries MS. 2019. Excited state intramolecular proton transfer in hydroxyanthraquinones: Toward predicting fading of organic red colorants in art. Science Advances. 5:eaaw5227.

Berenbeim JA, Boldissar S, Siouri FM, Gate G, Haggmark MR, Aboulache B, Cohen T, De Vries MS. 2017. Excited-State Dynamics of Isocytosine: A Hybrid Case of Canonical Nucleobase Photodynamics. The Journal of Physical Chemistry Letters. 8:5184–5189.

Bernard C., Burch T., DeTar C., Gottlieb S., Heller U.M., Hetrick J., Levkova L., Maresca F., Renner D., Sugar R. et al.. 2005. The Equation of State for QCD with 2+1 Flavors of Quarks, The MILC Collaboration. Proceedings of Science. (Lattice 2005):156.

Bezzola A., Bales B., Alkire R.C, Petzold L.R. 2013. Atomic Scale Resolution for Stochastic Simulations of Electrodeposition at the Micrometer Scale. Journal of ECS. (in press)

Bezzola A, Bales BB, Petzold LR, Alkire RC. 2014. Numerical Scaling Studies of Kinetically-Limited Electrochemical Nucleation and Growth with Accelerated Stochastic Simulations. Journal of The Electrochemical Society. 161:E3001–E3008.

Bhat S, Rouskas GN. 2018. Open Marketplace and Service Orchestration for Virtual Optical Networks.

BJ, Jr D, M S, LR P, A. S. 2015. Inferring single-cell gene expression mechanisms using stochastic simulation.. Bioinformatics. 31(9):1428-1435.

Bjaalie L, Janotti A, Himmetoglu B, Van de Walle CG. 2016. Metal versus insulator behavior in ultrathin SrTiO 3-based heterostructures. Physical Review B. 94(3):035115(6).

Bjaalie L, Ouellette DG, Moetakef P, Cain TA, Janotti A, Himmetoglu B, Allen SJ, Stemmer S, Van de Walle CG. 2015. Small hole polarons in rare-earth titanates. Applied Physics Letters. 106:232103.

Bjaalie L, Janotti A, Krishnaswamy K, Van de Walle CG. 2016. Point defects, impurities, and small hole polarons in GdTiO 3. Physical Review B. 93:115316.

Bjaalie L, Azcatl A, McDonnell S, Freeze CR, Stemmer S, Wallace RM, Van de Walle CG. 2016. Band alignments between SmTiO3, GdTiO3, and SrTiO3. Journal of Vacuum Science & Technology A. 34:061102.

Bjaalie L, Himmetoglu B, Weston L, Janotti A, Van de Walle GC. 2014. Oxide interfaces for novel electronic applications. New Journal of Physics. 16:025005.

Bjaalie L, Verma A, Himmetoglu B, Janotti A, Raghavan S, Protasenko V, Steenbergen EH, Jena D, Stemmer S, Van de Walle CG. 2015. Determination of the Mott-Hubbard gap in GdTiO 3. Physical Review B. 92:085111.

Bjaalie L, Janotti A, Himmetoglu B, Van de Walle CG. 2014. Turning SrTiO 3 into a Mott insulator. Physical Review B. 90:195117.

Blanco C, Bayas M, Yan F, Chen IA. 2018. Analysis of Evolutionarily Independent Protein-RNA Complexes Yields a Criterion to Evaluate the Relevance of Prebiotic Scenarios. Current Biology. 28:526–537.

Bleiholder C., Wyttenbach T., Bowers M.T. 2011. A novel projection approximation algorithm for the fast and accurate computation of molecular collision cross sections. Int. J. Mass Spectrom. -:inpress.

Bleiholder C, Do TD, Wu C, Economou NJ, Bernstein SS, Buratto SK, Shea J-E, Bowers MT. 2013. Ion Mobility Spectrometry Reveals the Mechanism of Amyloid Formation of A beta (25–35) and Its Modulation by Inhibitors at the Molecular Level: Epigallocatechin Gallate and Scyllo-inositol. Journal of the American Chemical Society. 135:16926–16937.

Bleiholder C, Dupuis NF, Bowers MThomas. 2013. Dimerization of Chirally Mutated Enkephalin Neurotransmitters: Implications for Peptide and Protein Aggregation Mechanisms. The Journal of Physical Chemistry B. 117:1770.

Bocarsly JD, Levin EE, Garcia CAC, Schwennicke K, Wilson SD, Seshadri R. 2017. A Simple Computational Proxy for Screening Magnetocaloric Compounds. Chemistry of Materials. 29:1613–1622.

Boldissar S, De Vries MS. 2018. How nature covers its bases. Physical Chemistry Chemical Physics. 20:9701–9716.

Bosse A.W, Sides S.W, Katsov K, García-Cervera C.J, Fredrickson G.H. 2006. Defects and their removal in block copolymer thin film simulations. Journal of polymer science. Part B, Polymer physics. -44:2495.

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Acknowledgements

Please acknowledge the CSC in publications and presentations if you are using our facilities computing resources in your research.

Use was made of computational facilities purchased with funds from the National Science Foundation (CNS-1725797) and administered by the Center for Scientific Computing (CSC). The CSC is supported by the California NanoSystems Institute and the Materials Research Science and Engineering Center (MRSEC; NSF DMR 1720256) at UC Santa Barbara.