Publications

Filters: Author is Chialastri, Alex  [Clear All Filters]
Journal Article
Sen M, Mooijman D, Boisset J-C, Chialastri A, Popovic M, Heindryckx B, Lopes SMChuva de, Dey SS, van Oudenaarden A.  2019.  Strand-specific single-cell methylomics reveals distinct modes of DNA demethylation dynamics during early mammalian development. bioRxiv. :804526.
Markodimitraki CM, Rang FJ, Rooijers K, de Vries SS, Chialastri A, de Luca KL, Lochs SJA, Mooijman D, Dey SS, Kind J.  2020.  Simultaneous quantification of protein–DNA interactions and transcriptomes in single cells with scDam&T-seq. Nature Protocols. :1–32.
Rooijers K, Markodimitraki CM, Rang FJ, de Vries SS, Chialastri A, de Luca KL, Mooijman D, Dey SS, Kind J.  2019.  Simultaneous quantification of protein–DNA contacts and transcriptomes in single cells. Nature biotechnology. :1.
Rooijers K, Markodimitraki CM, Rang FJ, de Vries SS, Chialastri A, de Luca KL, Mooijman D, Dey SS, Kind J.  2019.  scDam&T-seq combines DNA adenine methyltransferase-based labeling of protein-DNA contact sites with transcriptome sequencing to analyze regulatory programs in single cells. Nature biotechnology. 37:766.
Chialastri A, Karzbrun E, Khankhel AH, Radeke MJ, Streichan SJ, Dey SS.  2022.  Integrated single-cell sequencing reveals principles of epigenetic regulation of human gastrulation and germ cell development in a 3D organoid model. bioRxiv.
Chialastri A, Wangsanuwat C, Dey SS.  2021.  Integrated single-cell sequencing of 5-hydroxymethylcytosine and genomic DNA using scH&G-seq. STAR protocols. 2:101016.