Publications

CSC research acknowledged in publications and presentations.

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Use was made of computational facilities purchased with funds from the National Science Foundation (CNS-1725797) and administered by the Center for Scientific Computing (CSC). The CSC is supported by the California NanoSystems Institute and the Materials Research Science and Engineering Center (MRSEC; NSF DMR 2308708) at UC Santa Barbara.

Selected Publications

2025

Simulations of Eccentricity Growth in Compact Binary Accretion Disks with Magnetohydrodynamic Turbulence
Ohana, M., Jiang, Y. -F., Blaes, O., & Oyang, B. (2025). Simulations of Eccentricity Growth in Compact Binary Accretion Disks with Magnetohydrodynamic Turbulence. The Astrophysical Journal, 979, 128.
Characterizing the Sequence Landscape of Peptide Fibrillization with a Bottom-Up Coarse-Grained Model
Pretti, E., & Shell, S. (2025). Characterizing the Sequence Landscape of Peptide Fibrillization with a Bottom-Up Coarse-Grained Model. The Journal Of Physical Chemistry B, 129, 3559-3570.
Shedding light on patterns of unconventional expression of opsin genes in Hydra vulgaris
Stoilova, M., Picciani, N., Macias-Mu\~noz, A., & Oakley, T. H. (2025). Shedding light on patterns of unconventional expression of opsin genes in Hydra vulgaris. Integrative And Comparative Biology, icaf100.
Compatibilization of Immiscible Polymer Blends through Pendant Ionic Interactions
Edmund, J., Karnaukh, K., Xie, S., Murphy, E. A., Abdilla, A., Ino, E., et al. (2025). Compatibilization of Immiscible Polymer Blends through Pendant Ionic Interactions. Macromolecules, 58, 7425-7433.
Increasing light extraction efficiency for UV LEDs with a low coverage p-GaN hole injection layer
Wang, M., Gong, W., Wu, F., Tak, T., DenBaars, S. P., Nakamura, S., & Speck, J. S. (2025). Increasing light extraction efficiency for UV LEDs with a low coverage p-GaN hole injection layer. Optics Express, 33, 19391-19398.
Noise-augmented chaotic Ising machines for combinatorial optimization and sampling
Lee, K., Chowdhury, S., & Camsari, K. Y. (2025). Noise-augmented chaotic Ising machines for combinatorial optimization and sampling. Communications Physics, 8, 35.
Functional characterization of luciferase in a brittle star indicates parallel evolution influenced by genomic availability of haloalkane dehalogenase
Lau, E., Majerova, M., Hensley, N., Mukherjee, A., Vasina, M., Pluskal, D., et al. (2025). Functional characterization of luciferase in a brittle star indicates parallel evolution influenced by genomic availability of haloalkane dehalogenase. Molecular Biology And Evolution, 42, msaf081.
Geometry-Assisted Phase Selection: Interplay of Phase Heterogeneity and Geometry in Gyroid Shell Metamaterials Printed with 17-4 PH Stainless Steel
Pürstl, J., Fields, B., Ziemke, P., Ventura, N. \, Ainger, K., Apelian, D., et al. (2025). Geometry-Assisted Phase Selection: Interplay of Phase Heterogeneity and Geometry in Gyroid Shell Metamaterials Printed with 17-4 PH Stainless Steel. Advanced Engineering Materials, 2402309.
Ejecta Wakes from Companion Interaction in Type Ia Supernova Remnants
Prust, L., Kumar, G., & Bildsten, L. (2025). Ejecta Wakes from Companion Interaction in Type Ia Supernova Remnants. The Astrophysical Journal, 982, 60.
Universal phenomenological relations between spherical harmonic modes in nonprecessing eccentric binary black hole merger waveforms
Islam, T., & Venumadhav, T. (2025). Universal phenomenological relations between spherical harmonic modes in nonprecessing eccentric binary black hole merger waveforms. Physical Review D, 111, L081503.
Deformation pseudo-twinning of the L21-ordered intermetallic superlattice
Rhodes, B., Garg, P., Ventura, N. \, Mayer, J. A., Beyerlein, I. J., & Gianola, D. S. (2025). Deformation pseudo-twinning of the L21-ordered intermetallic superlattice. Scripta Materialia, 257, 116468.
A versatile machine learning workflow for high-throughput analysis of supported metal catalyst particles
Genc, A., Marlowe, J., Jalil, A., Belzberg, D., Kovarik, L., & Christopher, P. (2025). A versatile machine learning workflow for high-throughput analysis of supported metal catalyst particles. Ultramicroscopy, 271, 114116.
stagg:: A data pre-processing R package for climate impacts analysis
Liddell, T., Boser, A., Orofino, S., Mangin, T., & Carleton, T. (2025). stagg:: A data pre-processing R package for climate impacts analysis. Environmental Modelling \& Software, 183, 106202.
Consistency of spin effects between numerical relativity and perturbation theory for inspiraling comparable-mass black hole binaries
Islam, T., Khanna, G., & Field, S. (2025). Consistency of spin effects between numerical relativity and perturbation theory for inspiraling comparable-mass black hole binaries. Arxiv Preprint Arxiv:2510.00531.
Universal Phase Identification of Block Copolymers From Physics-Informed Machine Learning
Fang, X., Murphy, E. A., Kohl, P., Li, Y., Hawker, C. J., Bates, C. M., & Gu, M. (2025). Universal Phase Identification of Block Copolymers From Physics-Informed Machine Learning. Journal Of Polymer Science.
Efficient Computation of Single-Chain Partition Functions in Field-Theoretic Simulations of Polymers With Nested Tree-Like Topologies
Li, C., Delaney, K. T., Shell, S., & Fredrickson, G. H. (2025). Efficient Computation of Single-Chain Partition Functions in Field-Theoretic Simulations of Polymers With Nested Tree-Like Topologies. Macromolecular Theory And Simulations, e70000.
Telechelic Dithiol Copolymers as Tunable Building Blocks for Synthesizing Multiblock Materials
Czuczola, M., Hossain, M., Shannon, D., Morris, P., Getty, P., Bates, C. M., et al. (2025). Telechelic Dithiol Copolymers as Tunable Building Blocks for Synthesizing Multiblock Materials. Journal Of Polymer Science, 63, 759-765.
The Crucial Role of Vacancy Concentration in Enabling Superatomic Diffusion in Lithium Intermetallics
Behara, S. S., & Van der Ven, A. (2025). The Crucial Role of Vacancy Concentration in Enabling Superatomic Diffusion in Lithium Intermetallics. Acs Energy Letters, 10, 1772-1778.
De novo design of porphyrin-containing proteins as efficient and stereoselective catalysts
Hou, K., Huang, W., Qi, M., Tugwell, T., Alturaifi, T., Chen, Y., et al. (2025). De novo design of porphyrin-containing proteins as efficient and stereoselective catalysts. Science, 388, 665-670.
High-throughput Discovery of Anti-gap Semiconductors
Xiang, Z., Zhang, F., & Liao, B. (2025). High-throughput Discovery of Anti-gap Semiconductors. Arxiv Preprint Arxiv:2503.15782.